Bring a town over from Dolphin
You do not have to start again. The save file is the same format on both sides, and it goes both ways.
It is a normal memory card file
Animal Crossing writes its town to a GameCube memory card, and a .gci is one of those files taken off the card. Dolphin
writes them, real hardware writes them, and this reads and writes the
same thing. Nothing is converted and nothing is repacked.
Moving a town in
In Dolphin, open the memory card manager and export the Animal Crossing
save to a .gci file.
Here, open the Play page, click the save status in the top bar to open
the save options, and choose Import a save file. Pick the .gci and your
town loads.
Taking one back out
Same panel, Export a copy, and you get a .gci on your computer. Import it into Dolphin, or keep it as
a backup.
Worth doing either way. Your town lives in your browser's storage, and clearing site data would take it with everything else.
Or skip the file entirely
Signing in turns on cloud saves, and your town follows you to any device
you log in on. The .gci route is for bringing an existing town in, or for
keeping a copy somewhere we are not.
First time here? Start with the how to play guide.